Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cstf2tQ8C7E9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Zfp783-201ENSMUST00000095946 670 ntBASIC18■□□□□ 0.47
Cstf2tQ8C7E9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Gm42900-201ENSMUST00000197184 2167 ntBASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cstf2tQ8C7E9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cstf2tQ8C7E9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Cstf2tQ8C7E9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Gm2274-201ENSMUST00000184539 609 ntBASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cstf2tQ8C7E9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cstf2tQ8C7E9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms