Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp44Q8C2S0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp44Q8C2S0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp44Q8C2S0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Usp44Q8C2S0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp44Q8C2S0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp44Q8C2S0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp44Q8C2S0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.68■□□□□ 0.9
Usp44Q8C2S0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp44Q8C2S0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Gm10517-202ENSMUST00000192970 758 ntBASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Gm4974-201ENSMUST00000209974 875 ntBASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Usp44Q8C2S0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp44Q8C2S0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp44Q8C2S0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp44Q8C2S0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.66■□□□□ 0.9
Usp44Q8C2S0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp44Q8C2S0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Usp44Q8C2S0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.64■□□□□ 0.9
Usp44Q8C2S0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Usp44Q8C2S0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp44Q8C2S0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp44Q8C2S0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp44Q8C2S0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp44Q8C2S0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp44Q8C2S0 Mir1199-201ENSMUST00000117015 119 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms