Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm14822-201ENSMUST00000122247 291 ntBASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Gm43767-201ENSMUST00000198933 381 ntBASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd9Q8BYH8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Gm5745-201ENSMUST00000183748 313 ntBASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Gm10052-201ENSMUST00000168019 960 ntBASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Gm7729-201ENSMUST00000050143 801 ntBASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd9Q8BYH8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Gm24513-201ENSMUST00000174964 138 ntBASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd9Q8BYH8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Gm13474-201ENSMUST00000122466 815 ntBASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Chd9Q8BYH8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.9□□□□□ -0.18
Chd9Q8BYH8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms