Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cdkl3Q8BLF2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdkl3Q8BLF2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl3Q8BLF2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl3Q8BLF2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl3Q8BLF2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl3Q8BLF2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl3Q8BLF2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cdkl3Q8BLF2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl3Q8BLF2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl3Q8BLF2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms