Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nucks1Q80XU3 Flg-201ENSMUST00000050758 1488 ntBASIC18.88■□□□□ 0.61
Nucks1Q80XU3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nucks1Q80XU3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nucks1Q80XU3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nucks1Q80XU3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nucks1Q80XU3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nucks1Q80XU3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Rab3c-203ENSMUST00000224180 967 ntBASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Zfp783-201ENSMUST00000095946 670 ntBASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nucks1Q80XU3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nucks1Q80XU3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nucks1Q80XU3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nucks1Q80XU3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.84■□□□□ 0.61
Nucks1Q80XU3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nucks1Q80XU3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nucks1Q80XU3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nucks1Q80XU3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nucks1Q80XU3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nucks1Q80XU3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nucks1Q80XU3 Gm29791-202ENSMUST00000207888 369 ntBASIC18.83■□□□□ 0.6
Nucks1Q80XU3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nucks1Q80XU3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nucks1Q80XU3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nucks1Q80XU3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nucks1Q80XU3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nucks1Q80XU3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nucks1Q80XU3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Gm10418-201ENSMUST00000100943 576 ntBASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nucks1Q80XU3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nucks1Q80XU3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nucks1Q80XU3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms