Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp6nlQ80XC3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp6nlQ80XC3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp6nlQ80XC3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Usp6nlQ80XC3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Gm21559-201ENSMUST00000220638 855 ntBASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Gm8587-201ENSMUST00000076538 843 ntBASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp6nlQ80XC3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Gm29791-202ENSMUST00000207888 369 ntBASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Usp6nlQ80XC3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Mir1668-201ENSMUST00000184114 107 ntBASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp6nlQ80XC3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Gm7284-201ENSMUST00000131667 944 ntBASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Gm5587-201ENSMUST00000206270 674 ntBASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Il3ra-202ENSMUST00000223589 738 ntBASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.43■□□□□ 0.7
Usp6nlQ80XC3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp6nlQ80XC3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Gm27389-201ENSMUST00000183622 195 ntBASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms