Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Gm43514-201ENSMUST00000198852 424 ntBASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Gm34391-201ENSMUST00000203706 907 ntBASIC21.02■□□□□ 0.96
Nup188Q6ZQH8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nup188Q6ZQH8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nup188Q6ZQH8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nup188Q6ZQH8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21■□□□□ 0.95
Nup188Q6ZQH8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21■□□□□ 0.95
Nup188Q6ZQH8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Nup188Q6ZQH8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Nup188Q6ZQH8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Nup188Q6ZQH8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Gm18115-201ENSMUST00000221209 621 ntBASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nup188Q6ZQH8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nup188Q6ZQH8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 Gm26039-201ENSMUST00000158152 144 ntBASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 Mir3081-201ENSMUST00000175305 84 ntBASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nup188Q6ZQH8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.95
Nup188Q6ZQH8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms