Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Npc1l1Q6T3U4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Npc1l1Q6T3U4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Npc1l1Q6T3U4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Gm6659-201ENSMUST00000174752 547 ntBASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Gm21362-201ENSMUST00000194272 928 ntBASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Npc1l1Q6T3U4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Npc1l1Q6T3U4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Npc1l1Q6T3U4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Npc1l1Q6T3U4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Npc1l1Q6T3U4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Mir8112-201ENSMUST00000184382 131 ntBASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Gm10517-202ENSMUST00000192970 758 ntBASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Npc1l1Q6T3U4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms