Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Idnk-204ENSMUST00000226010 1898 ntBASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx58Q6Q899 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Gm18959-201ENSMUST00000208954 655 ntBASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx58Q6Q899 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx58Q6Q899 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.84■■□□□ 1.09
Ddx58Q6Q899 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx58Q6Q899 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx58Q6Q899 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Ddx58Q6Q899 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx58Q6Q899 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx58Q6Q899 Gm2274-201ENSMUST00000184539 609 ntBASIC21.82■■□□□ 1.08
Ddx58Q6Q899 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx58Q6Q899 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx58Q6Q899 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx58Q6Q899 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx58Q6Q899 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx58Q6Q899 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Gm45058-201ENSMUST00000205810 766 ntBASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx58Q6Q899 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ddx58Q6Q899 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx58Q6Q899 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx58Q6Q899 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx58Q6Q899 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx58Q6Q899 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx58Q6Q899 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ddx58Q6Q899 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Gm7791-201ENSMUST00000219066 539 ntBASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms