Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Nup98Q6PFD9 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.9■□□□□ 0.94
Nup98Q6PFD9 Gm10566-201ENSMUST00000086739 996 ntBASIC20.9■□□□□ 0.94
Nup98Q6PFD9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup98Q6PFD9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup98Q6PFD9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nup98Q6PFD9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nup98Q6PFD9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nup98Q6PFD9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Iqck-206ENSMUST00000208658 2891 ntBASIC20.89■□□□□ 0.93
Nup98Q6PFD9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nup98Q6PFD9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nup98Q6PFD9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup98Q6PFD9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nup98Q6PFD9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup98Q6PFD9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nup98Q6PFD9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nup98Q6PFD9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.83■□□□□ 0.93
Nup98Q6PFD9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup98Q6PFD9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup98Q6PFD9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.83■□□□□ 0.93
Nup98Q6PFD9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.83■□□□□ 0.93
Nup98Q6PFD9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup98Q6PFD9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup98Q6PFD9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup98Q6PFD9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup98Q6PFD9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup98Q6PFD9 Ank2-226ENSMUST00000189368 339 ntBASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms