Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.83■□□□□ 0.6
CtifQ6PEE2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CtifQ6PEE2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CtifQ6PEE2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CtifQ6PEE2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CtifQ6PEE2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CtifQ6PEE2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CtifQ6PEE2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CtifQ6PEE2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CtifQ6PEE2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.79■□□□□ 0.6
CtifQ6PEE2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.79■□□□□ 0.6
CtifQ6PEE2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.79■□□□□ 0.6
CtifQ6PEE2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CtifQ6PEE2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.78■□□□□ 0.6
CtifQ6PEE2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CtifQ6PEE2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CtifQ6PEE2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CtifQ6PEE2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CtifQ6PEE2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CtifQ6PEE2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms