Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.51■□□□□ 0.71
Herc4Q6PAV2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Gm10653-202ENSMUST00000139570 835 ntBASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Gm29791-202ENSMUST00000207888 369 ntBASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Herc4Q6PAV2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Herc4Q6PAV2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Herc4Q6PAV2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Herc4Q6PAV2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Herc4Q6PAV2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.49■□□□□ 0.71
Herc4Q6PAV2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Herc4Q6PAV2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Herc4Q6PAV2 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.49■□□□□ 0.71
Herc4Q6PAV2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Gm18666-201ENSMUST00000190039 958 ntBASIC19.48■□□□□ 0.71
Herc4Q6PAV2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Herc4Q6PAV2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Gm10418-201ENSMUST00000100943 576 ntBASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Herc4Q6PAV2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Herc4Q6PAV2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Herc4Q6PAV2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms