Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sp140Q6NSQ5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Gm12896-201ENSMUST00000118430 226 ntBASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Gm29791-202ENSMUST00000207888 369 ntBASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sp140Q6NSQ5 Dio3-201ENSMUST00000097228 1449 ntBASIC17.89■□□□□ 0.46
Sp140Q6NSQ5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sp140Q6NSQ5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sp140Q6NSQ5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sp140Q6NSQ5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sp140Q6NSQ5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sp140Q6NSQ5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sp140Q6NSQ5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Gm11249-201ENSMUST00000117071 859 ntBASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sp140Q6NSQ5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms