Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Six1Q62231 Flg-201ENSMUST00000050758 1488 ntBASIC18.13■□□□□ 0.49
Six1Q62231 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Six1Q62231 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six1Q62231 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six1Q62231 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Six1Q62231 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six1Q62231 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six1Q62231 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six1Q62231 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.12■□□□□ 0.49
Six1Q62231 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six1Q62231 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.12■□□□□ 0.49
Six1Q62231 Rab3c-203ENSMUST00000224180 967 ntBASIC18.12■□□□□ 0.49
Six1Q62231 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six1Q62231 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six1Q62231 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Six1Q62231 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Six1Q62231 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six1Q62231 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Six1Q62231 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six1Q62231 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Six1Q62231 Mtag2-201ENSMUST00000058665 714 ntBASIC18.11■□□□□ 0.49
Six1Q62231 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Six1Q62231 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six1Q62231 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six1Q62231 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six1Q62231 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six1Q62231 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six1Q62231 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Six1Q62231 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six1Q62231 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Six1Q62231 Gm10418-201ENSMUST00000100943 576 ntBASIC18.1■□□□□ 0.49
Six1Q62231 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Six1Q62231 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Six1Q62231 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Six1Q62231 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.1■□□□□ 0.49
Six1Q62231 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six1Q62231 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Six1Q62231 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six1Q62231 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six1Q62231 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six1Q62231 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.1■□□□□ 0.49
Six1Q62231 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six1Q62231 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Six1Q62231 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.09■□□□□ 0.49
Six1Q62231 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Six1Q62231 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Six1Q62231 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.09■□□□□ 0.49
Six1Q62231 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six1Q62231 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Six1Q62231 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six1Q62231 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Six1Q62231 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Six1Q62231 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six1Q62231 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six1Q62231 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six1Q62231 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six1Q62231 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Six1Q62231 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six1Q62231 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six1Q62231 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Six1Q62231 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six1Q62231 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.08■□□□□ 0.48
Six1Q62231 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six1Q62231 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.07■□□□□ 0.48
Six1Q62231 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.07■□□□□ 0.48
Six1Q62231 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.07■□□□□ 0.48
Six1Q62231 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Six1Q62231 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.07■□□□□ 0.48
Six1Q62231 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.07■□□□□ 0.48
Six1Q62231 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.07■□□□□ 0.48
Six1Q62231 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six1Q62231 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.07■□□□□ 0.48
Six1Q62231 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six1Q62231 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six1Q62231 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.06■□□□□ 0.48
Six1Q62231 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six1Q62231 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six1Q62231 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six1Q62231 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms