Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scnn1aQ61180 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.34■□□□□ 0.85
Scnn1aQ61180 Mir8112-201ENSMUST00000184382 131 ntBASIC20.34■□□□□ 0.85
Scnn1aQ61180 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Scnn1aQ61180 Gm9731-201ENSMUST00000209480 747 ntBASIC20.34■□□□□ 0.85
Scnn1aQ61180 Gm18032-201ENSMUST00000222541 538 ntBASIC20.34■□□□□ 0.85
Scnn1aQ61180 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.34■□□□□ 0.85
Scnn1aQ61180 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scnn1aQ61180 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Scnn1aQ61180 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scnn1aQ61180 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scnn1aQ61180 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scnn1aQ61180 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scnn1aQ61180 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scnn1aQ61180 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scnn1aQ61180 Mir5130-201ENSMUST00000175160 84 ntBASIC20.33■□□□□ 0.85
Scnn1aQ61180 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scnn1aQ61180 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Scnn1aQ61180 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scnn1aQ61180 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scnn1aQ61180 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Gm6659-201ENSMUST00000174752 547 ntBASIC20.31■□□□□ 0.84
Scnn1aQ61180 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Il3ra-202ENSMUST00000223589 738 ntBASIC20.31■□□□□ 0.84
Scnn1aQ61180 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scnn1aQ61180 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scnn1aQ61180 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Gm16061-201ENSMUST00000122167 857 ntBASIC20.3■□□□□ 0.84
Scnn1aQ61180 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scnn1aQ61180 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.29■□□□□ 0.84
Scnn1aQ61180 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.29■□□□□ 0.84
Scnn1aQ61180 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.29■□□□□ 0.84
Scnn1aQ61180 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.29■□□□□ 0.84
Scnn1aQ61180 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scnn1aQ61180 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Gm10013-201ENSMUST00000106074 672 ntBASIC20.28■□□□□ 0.84
Scnn1aQ61180 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Scnn1aQ61180 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scnn1aQ61180 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.27■□□□□ 0.84
Scnn1aQ61180 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Gm17661-201ENSMUST00000170317 270 ntBASIC20.27■□□□□ 0.84
Scnn1aQ61180 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scnn1aQ61180 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms