Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scarf1Q5ND28 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.32■□□□□ 0.68
Scarf1Q5ND28 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scarf1Q5ND28 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.32■□□□□ 0.68
Scarf1Q5ND28 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.32■□□□□ 0.68
Scarf1Q5ND28 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scarf1Q5ND28 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scarf1Q5ND28 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scarf1Q5ND28 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Gm43371-201ENSMUST00000202838 1031 ntBASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.31■□□□□ 0.68
Scarf1Q5ND28 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarf1Q5ND28 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scarf1Q5ND28 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarf1Q5ND28 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Gm21814-202ENSMUST00000203277 873 ntBASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scarf1Q5ND28 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scarf1Q5ND28 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scarf1Q5ND28 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scarf1Q5ND28 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms