Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Spg11Q3UHA3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Spg11Q3UHA3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Spg11Q3UHA3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.33■□□□□ 0.21
Spg11Q3UHA3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Spg11Q3UHA3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Gm27321-201ENSMUST00000185021 205 ntBASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Gm9731-201ENSMUST00000209480 747 ntBASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Spg11Q3UHA3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Gm24841-201ENSMUST00000158676 357 ntBASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Spg11Q3UHA3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Spg11Q3UHA3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Spg11Q3UHA3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.29■□□□□ 0.2
Spg11Q3UHA3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Spg11Q3UHA3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms