Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Carmil3Q3UFQ8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Gm24841-201ENSMUST00000158676 357 ntBASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Carmil3Q3UFQ8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Carmil3Q3UFQ8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Gm7791-201ENSMUST00000219066 539 ntBASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Carmil3Q3UFQ8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Gm7638-201ENSMUST00000121348 967 ntBASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.25■□□□□ 0.99
Carmil3Q3UFQ8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Carmil3Q3UFQ8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Gm13474-201ENSMUST00000122466 815 ntBASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Gm27741-201ENSMUST00000185060 237 ntBASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms