Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pdlim7Q3TJD7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Mir3081-201ENSMUST00000175305 84 ntBASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pdlim7Q3TJD7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 Gm18958-201ENSMUST00000174258 762 ntBASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pdlim7Q3TJD7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Gm11950-201ENSMUST00000121615 838 ntBASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Gm27357-201ENSMUST00000183754 135 ntBASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Pdlim7Q3TJD7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Gm24589-201ENSMUST00000116692 94 ntBASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Gm11355-201ENSMUST00000121120 306 ntBASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim7Q3TJD7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Gm13401-201ENSMUST00000117074 291 ntBASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pdlim7Q3TJD7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pdlim7Q3TJD7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pdlim7Q3TJD7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pdlim7Q3TJD7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Mzt1-203ENSMUST00000227948 952 ntBASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim7Q3TJD7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.81■□□□□ 0.76
Pdlim7Q3TJD7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.81■□□□□ 0.76
Pdlim7Q3TJD7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms