Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3KNL4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3KNL4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3KNL4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3KNL4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3KNL4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3KNL4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Q3KNL4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Q3KNL4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Q3KNL4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Q3KNL4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.35■□□□□ 0.37
Q3KNL4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q3KNL4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Q3KNL4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Q3KNL4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Q3KNL4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.34■□□□□ 0.37
Q3KNL4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3KNL4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q3KNL4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q3KNL4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.33■□□□□ 0.37
Q3KNL4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q3KNL4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Q3KNL4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.33■□□□□ 0.36
Q3KNL4 Gm8969-201ENSMUST00000199694 526 ntBASIC17.33■□□□□ 0.36
Q3KNL4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q3KNL4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q3KNL4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.33■□□□□ 0.36
Q3KNL4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q3KNL4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.33■□□□□ 0.36
Q3KNL4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q3KNL4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q3KNL4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.32■□□□□ 0.36
Q3KNL4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.32■□□□□ 0.36
Q3KNL4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.32■□□□□ 0.36
Q3KNL4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Q3KNL4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Q3KNL4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q3KNL4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Q3KNL4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Q3KNL4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.31■□□□□ 0.36
Q3KNL4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.31■□□□□ 0.36
Q3KNL4 Gm42569-201ENSMUST00000200539 472 ntBASIC17.31■□□□□ 0.36
Q3KNL4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Q3KNL4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q3KNL4 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.31■□□□□ 0.36
Q3KNL4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
Q3KNL4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Q3KNL4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.3■□□□□ 0.36
Q3KNL4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.3■□□□□ 0.36
Q3KNL4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Q3KNL4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms