Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.16□□□□□ -0.46
PrkdcP97313 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
PrkdcP97313 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.16□□□□□ -0.46
PrkdcP97313 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PrkdcP97313 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PrkdcP97313 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PrkdcP97313 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.16□□□□□ -0.46
PrkdcP97313 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PrkdcP97313 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.16□□□□□ -0.46
PrkdcP97313 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PrkdcP97313 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PrkdcP97313 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PrkdcP97313 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.16□□□□□ -0.46
PrkdcP97313 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
PrkdcP97313 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
PrkdcP97313 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC12.16□□□□□ -0.46
PrkdcP97313 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PrkdcP97313 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.15□□□□□ -0.46
PrkdcP97313 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
PrkdcP97313 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
PrkdcP97313 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.15□□□□□ -0.46
PrkdcP97313 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PrkdcP97313 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.15□□□□□ -0.46
PrkdcP97313 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrkdcP97313 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PrkdcP97313 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PrkdcP97313 Gm7862-201ENSMUST00000121461 292 ntBASIC12.14□□□□□ -0.47
PrkdcP97313 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PrkdcP97313 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PrkdcP97313 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.14□□□□□ -0.47
PrkdcP97313 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.14□□□□□ -0.47
PrkdcP97313 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PrkdcP97313 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PrkdcP97313 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.14□□□□□ -0.47
PrkdcP97313 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PrkdcP97313 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.14□□□□□ -0.47
PrkdcP97313 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.14□□□□□ -0.47
PrkdcP97313 Gm6277-202ENSMUST00000224036 2779 ntBASIC12.14□□□□□ -0.47
PrkdcP97313 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PrkdcP97313 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PrkdcP97313 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrkdcP97313 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PrkdcP97313 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.13□□□□□ -0.47
PrkdcP97313 Psmb5-202ENSMUST00000227257 622 ntBASIC12.13□□□□□ -0.47
PrkdcP97313 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.13□□□□□ -0.47
PrkdcP97313 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.13□□□□□ -0.47
PrkdcP97313 Gm9731-201ENSMUST00000209480 747 ntBASIC12.13□□□□□ -0.47
PrkdcP97313 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.13□□□□□ -0.47
PrkdcP97313 Gm5186-201ENSMUST00000218781 920 ntBASIC12.13□□□□□ -0.47
PrkdcP97313 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.13□□□□□ -0.47
PrkdcP97313 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.13□□□□□ -0.47
PrkdcP97313 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms