Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43cP86449 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim43cP86449 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.21■□□□□ 0.67
Trim43cP86449 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43cP86449 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43cP86449 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43cP86449 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Trim43cP86449 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.21■□□□□ 0.67
Trim43cP86449 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim43cP86449 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43cP86449 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43cP86449 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Trim43cP86449 Gm20760-201ENSMUST00000179197 648 ntBASIC19.2■□□□□ 0.66
Trim43cP86449 Gm27011-201ENSMUST00000182352 972 ntBASIC19.2■□□□□ 0.66
Trim43cP86449 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43cP86449 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43cP86449 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim43cP86449 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.19■□□□□ 0.66
Trim43cP86449 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Trim43cP86449 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43cP86449 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim43cP86449 Gm6576-201ENSMUST00000169678 883 ntBASIC19.19■□□□□ 0.66
Trim43cP86449 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim43cP86449 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43cP86449 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43cP86449 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43cP86449 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim43cP86449 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim43cP86449 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43cP86449 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43cP86449 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43cP86449 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Trim43cP86449 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim43cP86449 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43cP86449 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Trim43cP86449 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim43cP86449 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43cP86449 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim43cP86449 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43cP86449 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43cP86449 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim43cP86449 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim43cP86449 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43cP86449 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim43cP86449 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim43cP86449 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim43cP86449 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim43cP86449 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.16■□□□□ 0.66
Trim43cP86449 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim43cP86449 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 Gm43183-201ENSMUST00000200632 547 ntBASIC19.16■□□□□ 0.66
Trim43cP86449 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim43cP86449 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43cP86449 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim43cP86449 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim43cP86449 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Trim43cP86449 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43cP86449 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim43cP86449 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim43cP86449 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Trim43cP86449 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim43cP86449 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43cP86449 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43cP86449 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43cP86449 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms