Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shox2P70390 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Shox2P70390 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.47■□□□□ 0.39
Shox2P70390 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.47■□□□□ 0.39
Shox2P70390 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Shox2P70390 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.47■□□□□ 0.39
Shox2P70390 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shox2P70390 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.46■□□□□ 0.39
Shox2P70390 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Shox2P70390 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.46■□□□□ 0.39
Shox2P70390 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.46■□□□□ 0.39
Shox2P70390 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shox2P70390 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shox2P70390 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shox2P70390 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Shox2P70390 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shox2P70390 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shox2P70390 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.45■□□□□ 0.38
Shox2P70390 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Shox2P70390 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Shox2P70390 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Shox2P70390 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Shox2P70390 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.45■□□□□ 0.38
Shox2P70390 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Shox2P70390 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Shox2P70390 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shox2P70390 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.44■□□□□ 0.38
Shox2P70390 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.44■□□□□ 0.38
Shox2P70390 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Shox2P70390 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Shox2P70390 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.44■□□□□ 0.38
Shox2P70390 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Shox2P70390 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Shox2P70390 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Shox2P70390 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shox2P70390 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Shox2P70390 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms