Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crnkl1P63154 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crnkl1P63154 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.47■□□□□ 0.39
Crnkl1P63154 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Crnkl1P63154 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.46■□□□□ 0.39
Crnkl1P63154 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Crnkl1P63154 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.46■□□□□ 0.39
Crnkl1P63154 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Gm27801-201ENSMUST00000184174 223 ntBASIC17.46■□□□□ 0.39
Crnkl1P63154 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.46■□□□□ 0.39
Crnkl1P63154 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Crnkl1P63154 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Crnkl1P63154 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Crnkl1P63154 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Crnkl1P63154 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.45■□□□□ 0.38
Crnkl1P63154 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Crnkl1P63154 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Crnkl1P63154 Gm18284-201ENSMUST00000172604 624 ntBASIC17.45■□□□□ 0.38
Crnkl1P63154 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.45■□□□□ 0.38
Crnkl1P63154 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Crnkl1P63154 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Crnkl1P63154 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Crnkl1P63154 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Crnkl1P63154 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.44■□□□□ 0.38
Crnkl1P63154 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Crnkl1P63154 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.44■□□□□ 0.38
Crnkl1P63154 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.44■□□□□ 0.38
Crnkl1P63154 Gm5874-201ENSMUST00000096101 508 ntBASIC17.44■□□□□ 0.38
Crnkl1P63154 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Crnkl1P63154 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Crnkl1P63154 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.43■□□□□ 0.38
Crnkl1P63154 Gm10493-201ENSMUST00000097270 612 ntBASIC17.43■□□□□ 0.38
Crnkl1P63154 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Crnkl1P63154 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Crnkl1P63154 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.43■□□□□ 0.38
Crnkl1P63154 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Crnkl1P63154 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Crnkl1P63154 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Crnkl1P63154 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Tgds-204ENSMUST00000228543 1594 ntBASIC17.42■□□□□ 0.38
Crnkl1P63154 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Gm8495-201ENSMUST00000188740 694 ntBASIC17.42■□□□□ 0.38
Crnkl1P63154 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.42■□□□□ 0.38
Crnkl1P63154 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Crnkl1P63154 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Crnkl1P63154 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Crnkl1P63154 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Crnkl1P63154 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Crnkl1P63154 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms