Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lsm6P62313 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Lsm6P62313 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lsm6P62313 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.47■□□□□ 0.07
Lsm6P62313 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Gm11643-201ENSMUST00000119578 864 ntBASIC15.47■□□□□ 0.07
Lsm6P62313 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.47■□□□□ 0.07
Lsm6P62313 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.47■□□□□ 0.07
Lsm6P62313 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.47■□□□□ 0.07
Lsm6P62313 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.47■□□□□ 0.07
Lsm6P62313 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lsm6P62313 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lsm6P62313 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.46■□□□□ 0.07
Lsm6P62313 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Lsm6P62313 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Lsm6P62313 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 Gm11249-201ENSMUST00000117071 859 ntBASIC15.46■□□□□ 0.07
Lsm6P62313 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.46■□□□□ 0.07
Lsm6P62313 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lsm6P62313 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Lsm6P62313 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.46■□□□□ 0.06
Lsm6P62313 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Lsm6P62313 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.45■□□□□ 0.06
Lsm6P62313 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.45■□□□□ 0.06
Lsm6P62313 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Lsm6P62313 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Gm15375-201ENSMUST00000119510 849 ntBASIC15.45■□□□□ 0.06
Lsm6P62313 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.45■□□□□ 0.06
Lsm6P62313 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.45■□□□□ 0.06
Lsm6P62313 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.45■□□□□ 0.06
Lsm6P62313 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Lsm6P62313 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.45■□□□□ 0.06
Lsm6P62313 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lsm6P62313 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.45■□□□□ 0.06
Lsm6P62313 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Lsm6P62313 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lsm6P62313 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Lsm6P62313 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Lsm6P62313 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Lsm6P62313 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Lsm6P62313 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.44■□□□□ 0.06
Lsm6P62313 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.44■□□□□ 0.06
Lsm6P62313 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.44■□□□□ 0.06
Lsm6P62313 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lsm6P62313 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.43■□□□□ 0.06
Lsm6P62313 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Gm13158-201ENSMUST00000122007 736 ntBASIC15.43■□□□□ 0.06
Lsm6P62313 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Lsm6P62313 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lsm6P62313 Mir8112-201ENSMUST00000184382 131 ntBASIC15.43■□□□□ 0.06
Lsm6P62313 Gm20049-201ENSMUST00000219950 730 ntBASIC15.43■□□□□ 0.06
Lsm6P62313 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms