Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Usp46P62069 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.43■□□□□ 0.54
Usp46P62069 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Usp46P62069 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp46P62069 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Usp46P62069 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Usp46P62069 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp46P62069 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.42■□□□□ 0.54
Usp46P62069 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.42■□□□□ 0.54
Usp46P62069 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Usp46P62069 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp46P62069 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp46P62069 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
Usp46P62069 Gm11643-201ENSMUST00000119578 864 ntBASIC18.41■□□□□ 0.54
Usp46P62069 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Usp46P62069 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Usp46P62069 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Gm10517-202ENSMUST00000192970 758 ntBASIC18.41■□□□□ 0.54
Usp46P62069 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp46P62069 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp46P62069 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp46P62069 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp46P62069 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp46P62069 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp46P62069 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.4■□□□□ 0.54
Usp46P62069 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Usp46P62069 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp46P62069 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Usp46P62069 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp46P62069 Gm3375-201ENSMUST00000203929 796 ntBASIC18.4■□□□□ 0.54
Usp46P62069 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.4■□□□□ 0.54
Usp46P62069 Timm23-208ENSMUST00000226683 750 ntBASIC18.4■□□□□ 0.54
Usp46P62069 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Usp46P62069 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp46P62069 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp46P62069 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp46P62069 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp46P62069 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp46P62069 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Usp46P62069 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp46P62069 Gm43799-201ENSMUST00000201845 579 ntBASIC18.39■□□□□ 0.53
Usp46P62069 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp46P62069 Odf3b-204ENSMUST00000227834 930 ntBASIC18.39■□□□□ 0.53
Usp46P62069 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Usp46P62069 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Usp46P62069 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp46P62069 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms