Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rrp1P56183 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rrp1P56183 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rrp1P56183 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Mir8112-201ENSMUST00000184382 131 ntBASIC19.91■□□□□ 0.78
Rrp1P56183 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rrp1P56183 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rrp1P56183 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rrp1P56183 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.9■□□□□ 0.78
Rrp1P56183 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.9■□□□□ 0.78
Rrp1P56183 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Rrp1P56183 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rrp1P56183 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Rrp1P56183 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Rrp1P56183 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.9■□□□□ 0.78
Rrp1P56183 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rrp1P56183 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.9■□□□□ 0.78
Rrp1P56183 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.9■□□□□ 0.78
Rrp1P56183 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rrp1P56183 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rrp1P56183 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Rrp1P56183 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Rrp1P56183 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rrp1P56183 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rrp1P56183 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.9■□□□□ 0.78
Rrp1P56183 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rrp1P56183 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.89■□□□□ 0.78
Rrp1P56183 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rrp1P56183 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rrp1P56183 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rrp1P56183 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rrp1P56183 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rrp1P56183 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rrp1P56183 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Rrp1P56183 Gm26571-201ENSMUST00000181399 666 ntBASIC19.89■□□□□ 0.77
Rrp1P56183 Gm38285-201ENSMUST00000192928 922 ntBASIC19.89■□□□□ 0.77
Rrp1P56183 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.89■□□□□ 0.77
Rrp1P56183 Gm29791-202ENSMUST00000207888 369 ntBASIC19.89■□□□□ 0.77
Rrp1P56183 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rrp1P56183 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.89■□□□□ 0.77
Rrp1P56183 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rrp1P56183 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rrp1P56183 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rrp1P56183 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rrp1P56183 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.89■□□□□ 0.77
Rrp1P56183 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rrp1P56183 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rrp1P56183 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rrp1P56183 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.88■□□□□ 0.77
Rrp1P56183 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rrp1P56183 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.88■□□□□ 0.77
Rrp1P56183 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Rrp1P56183 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.88■□□□□ 0.77
Rrp1P56183 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.88■□□□□ 0.77
Rrp1P56183 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.88■□□□□ 0.77
Rrp1P56183 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.88■□□□□ 0.77
Rrp1P56183 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rrp1P56183 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rrp1P56183 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rrp1P56183 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrp1P56183 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrp1P56183 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rrp1P56183 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rrp1P56183 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrp1P56183 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.87■□□□□ 0.77
Rrp1P56183 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrp1P56183 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rrp1P56183 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrp1P56183 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrp1P56183 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrp1P56183 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rrp1P56183 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rrp1P56183 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rrp1P56183 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.86■□□□□ 0.77
Rrp1P56183 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rrp1P56183 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rrp1P56183 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.86■□□□□ 0.77
Rrp1P56183 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.86■□□□□ 0.77
Rrp1P56183 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rrp1P56183 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.86■□□□□ 0.77
Rrp1P56183 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.86■□□□□ 0.77
Rrp1P56183 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms