Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx3P48381 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx3P48381 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx3P48381 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx3P48381 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.95■□□□□ 0.14
Rfx3P48381 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
Rfx3P48381 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rfx3P48381 Gm7290-201ENSMUST00000104990 617 ntBASIC15.95■□□□□ 0.14
Rfx3P48381 Gm12918-201ENSMUST00000120234 636 ntBASIC15.95■□□□□ 0.14
Rfx3P48381 Gm15710-201ENSMUST00000121821 636 ntBASIC15.95■□□□□ 0.14
Rfx3P48381 Gm5075-201ENSMUST00000196916 622 ntBASIC15.95■□□□□ 0.14
Rfx3P48381 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.95■□□□□ 0.14
Rfx3P48381 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx3P48381 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.95■□□□□ 0.14
Rfx3P48381 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.95■□□□□ 0.14
Rfx3P48381 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx3P48381 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx3P48381 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rfx3P48381 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.94■□□□□ 0.14
Rfx3P48381 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rfx3P48381 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.94■□□□□ 0.14
Rfx3P48381 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rfx3P48381 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rfx3P48381 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rfx3P48381 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rfx3P48381 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rfx3P48381 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.93■□□□□ 0.14
Rfx3P48381 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rfx3P48381 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rfx3P48381 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.92■□□□□ 0.14
Rfx3P48381 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rfx3P48381 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.92■□□□□ 0.14
Rfx3P48381 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rfx3P48381 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.92■□□□□ 0.14
Rfx3P48381 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.92■□□□□ 0.14
Rfx3P48381 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.92■□□□□ 0.14
Rfx3P48381 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.92■□□□□ 0.14
Rfx3P48381 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rfx3P48381 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.92■□□□□ 0.14
Rfx3P48381 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Tgds-204ENSMUST00000228543 1594 ntBASIC15.92■□□□□ 0.14
Rfx3P48381 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfx3P48381 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.91■□□□□ 0.14
Rfx3P48381 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rfx3P48381 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.91■□□□□ 0.14
Rfx3P48381 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.91■□□□□ 0.14
Rfx3P48381 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rfx3P48381 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.91■□□□□ 0.14
Rfx3P48381 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfx3P48381 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rfx3P48381 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms