Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4bP46467 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps4bP46467 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps4bP46467 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4bP46467 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4bP46467 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4bP46467 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4bP46467 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4bP46467 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4bP46467 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4bP46467 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4bP46467 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Vps4bP46467 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.88■□□□□ 0.45
Vps4bP46467 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.88■□□□□ 0.45
Vps4bP46467 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Vps4bP46467 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.88■□□□□ 0.45
Vps4bP46467 Gm44549-201ENSMUST00000208351 577 ntBASIC17.88■□□□□ 0.45
Vps4bP46467 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4bP46467 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vps4bP46467 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Vps4bP46467 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vps4bP46467 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.87■□□□□ 0.45
Vps4bP46467 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.87■□□□□ 0.45
Vps4bP46467 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Vps4bP46467 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4bP46467 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vps4bP46467 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Vps4bP46467 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.86■□□□□ 0.45
Vps4bP46467 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Vps4bP46467 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Vps4bP46467 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Vps4bP46467 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.86■□□□□ 0.45
Vps4bP46467 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps4bP46467 Zfp783-201ENSMUST00000095946 670 ntBASIC17.86■□□□□ 0.45
Vps4bP46467 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Flg-201ENSMUST00000050758 1488 ntBASIC17.86■□□□□ 0.45
Vps4bP46467 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4bP46467 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.86■□□□□ 0.45
Vps4bP46467 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Vps4bP46467 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Gm10418-201ENSMUST00000100943 576 ntBASIC17.85■□□□□ 0.45
Vps4bP46467 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Vps4bP46467 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.85■□□□□ 0.45
Vps4bP46467 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.85■□□□□ 0.45
Vps4bP46467 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vps4bP46467 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.84■□□□□ 0.45
Vps4bP46467 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms