Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HttP42859 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HttP42859 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HttP42859 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HttP42859 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.96■□□□□ 0.63
HttP42859 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HttP42859 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HttP42859 Gm4995-201ENSMUST00000117247 432 ntBASIC18.96■□□□□ 0.63
HttP42859 Gm8000-201ENSMUST00000188378 592 ntBASIC18.96■□□□□ 0.63
HttP42859 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.96■□□□□ 0.63
HttP42859 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HttP42859 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
HttP42859 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HttP42859 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HttP42859 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.95■□□□□ 0.62
HttP42859 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HttP42859 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HttP42859 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.95■□□□□ 0.62
HttP42859 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.95■□□□□ 0.62
HttP42859 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HttP42859 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.95■□□□□ 0.62
HttP42859 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HttP42859 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HttP42859 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.94■□□□□ 0.62
HttP42859 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HttP42859 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.94■□□□□ 0.62
HttP42859 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.94■□□□□ 0.62
HttP42859 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.94■□□□□ 0.62
HttP42859 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HttP42859 Gm13401-201ENSMUST00000117074 291 ntBASIC18.94■□□□□ 0.62
HttP42859 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HttP42859 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.94■□□□□ 0.62
HttP42859 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.94■□□□□ 0.62
HttP42859 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HttP42859 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Gm5264-201ENSMUST00000190584 848 ntBASIC18.93■□□□□ 0.62
HttP42859 Gm5364-201ENSMUST00000216789 889 ntBASIC18.93■□□□□ 0.62
HttP42859 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.93■□□□□ 0.62
HttP42859 Gm6736-201ENSMUST00000166583 948 ntBASIC18.93■□□□□ 0.62
HttP42859 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HttP42859 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HttP42859 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HttP42859 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HttP42859 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HttP42859 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HttP42859 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HttP42859 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HttP42859 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
HttP42859 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HttP42859 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HttP42859 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HttP42859 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.91■□□□□ 0.62
HttP42859 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HttP42859 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
HttP42859 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.91■□□□□ 0.62
HttP42859 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Gm44357-201ENSMUST00000195897 142 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm19658-201ENSMUST00000196231 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44367-201ENSMUST00000196836 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44350-201ENSMUST00000197197 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44390-201ENSMUST00000197533 144 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44313-201ENSMUST00000198018 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44486-201ENSMUST00000198508 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44454-201ENSMUST00000198541 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44314-201ENSMUST00000199263 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44394-201ENSMUST00000199558 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44484-201ENSMUST00000199873 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44466-201ENSMUST00000200264 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Gm44359-201ENSMUST00000200671 138 ntBASIC18.91■□□□□ 0.62
HttP42859 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HttP42859 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms