Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cxcl12P40224 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cxcl12P40224 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cxcl12P40224 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cxcl12P40224 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cxcl12P40224 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cxcl12P40224 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cxcl12P40224 Gm13884-201ENSMUST00000118103 829 ntBASIC18.2■□□□□ 0.5
Cxcl12P40224 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Gm27459-201ENSMUST00000184860 107 ntBASIC18.2■□□□□ 0.5
Cxcl12P40224 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.2■□□□□ 0.5
Cxcl12P40224 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cxcl12P40224 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.19■□□□□ 0.5
Cxcl12P40224 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cxcl12P40224 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cxcl12P40224 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cxcl12P40224 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.18■□□□□ 0.5
Cxcl12P40224 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.18■□□□□ 0.5
Cxcl12P40224 Gm18733-201ENSMUST00000173950 856 ntBASIC18.18■□□□□ 0.5
Cxcl12P40224 Gm43347-201ENSMUST00000200226 580 ntBASIC18.18■□□□□ 0.5
Cxcl12P40224 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.18■□□□□ 0.5
Cxcl12P40224 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.18■□□□□ 0.5
Cxcl12P40224 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cxcl12P40224 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.17■□□□□ 0.5
Cxcl12P40224 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cxcl12P40224 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.17■□□□□ 0.5
Cxcl12P40224 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.17■□□□□ 0.5
Cxcl12P40224 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cxcl12P40224 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cxcl12P40224 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Cxcl12P40224 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.16■□□□□ 0.5
Cxcl12P40224 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cxcl12P40224 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.16■□□□□ 0.5
Cxcl12P40224 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.16■□□□□ 0.5
Cxcl12P40224 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.16■□□□□ 0.5
Cxcl12P40224 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.16■□□□□ 0.5
Cxcl12P40224 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cxcl12P40224 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl12P40224 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cxcl12P40224 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl12P40224 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms