Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HmgclP38060 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.4■□□□□ 0.38
HmgclP38060 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.4■□□□□ 0.38
HmgclP38060 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HmgclP38060 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
HmgclP38060 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HmgclP38060 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.39■□□□□ 0.37
HmgclP38060 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.39■□□□□ 0.37
HmgclP38060 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HmgclP38060 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.39■□□□□ 0.37
HmgclP38060 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HmgclP38060 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HmgclP38060 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.39■□□□□ 0.37
HmgclP38060 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HmgclP38060 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HmgclP38060 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.39■□□□□ 0.37
HmgclP38060 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HmgclP38060 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HmgclP38060 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HmgclP38060 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HmgclP38060 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HmgclP38060 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HmgclP38060 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HmgclP38060 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HmgclP38060 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HmgclP38060 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.38■□□□□ 0.37
HmgclP38060 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HmgclP38060 Gm37292-201ENSMUST00000192062 758 ntBASIC17.38■□□□□ 0.37
HmgclP38060 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.38■□□□□ 0.37
HmgclP38060 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HmgclP38060 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HmgclP38060 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HmgclP38060 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HmgclP38060 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HmgclP38060 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HmgclP38060 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.37■□□□□ 0.37
HmgclP38060 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.37■□□□□ 0.37
HmgclP38060 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HmgclP38060 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.36■□□□□ 0.37
HmgclP38060 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
HmgclP38060 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.36■□□□□ 0.37
HmgclP38060 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HmgclP38060 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.36■□□□□ 0.37
HmgclP38060 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Gm15378-201ENSMUST00000121894 207 ntBASIC17.36■□□□□ 0.37
HmgclP38060 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.36■□□□□ 0.37
HmgclP38060 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.36■□□□□ 0.37
HmgclP38060 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HmgclP38060 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HmgclP38060 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HmgclP38060 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HmgclP38060 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HmgclP38060 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HmgclP38060 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HmgclP38060 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HmgclP38060 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HmgclP38060 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HmgclP38060 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HmgclP38060 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HmgclP38060 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HmgclP38060 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HmgclP38060 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.34■□□□□ 0.37
HmgclP38060 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Gm10698-201ENSMUST00000182663 604 ntBASIC17.34■□□□□ 0.37
HmgclP38060 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Gm43183-201ENSMUST00000200632 547 ntBASIC17.34■□□□□ 0.37
HmgclP38060 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms