Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.43□□□□□ -0.1
Rab5cP35278 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Rab5cP35278 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Gm13238-201ENSMUST00000117655 780 ntBASIC14.43□□□□□ -0.1
Rab5cP35278 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rab5cP35278 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rab5cP35278 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab5cP35278 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.42□□□□□ -0.1
Rab5cP35278 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.42□□□□□ -0.1
Rab5cP35278 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rab5cP35278 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rab5cP35278 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rab5cP35278 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.42□□□□□ -0.1
Rab5cP35278 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab5cP35278 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rab5cP35278 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rab5cP35278 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.41□□□□□ -0.1
Rab5cP35278 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.41□□□□□ -0.1
Rab5cP35278 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.41□□□□□ -0.1
Rab5cP35278 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rab5cP35278 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab5cP35278 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rab5cP35278 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rab5cP35278 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rab5cP35278 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab5cP35278 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.4□□□□□ -0.1
Rab5cP35278 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rab5cP35278 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rab5cP35278 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rab5cP35278 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab5cP35278 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab5cP35278 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rab5cP35278 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rab5cP35278 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms