Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm29791-202ENSMUST00000207888 369 ntBASIC16.35■□□□□ 0.21
Tnfrsf1bP25119 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf1bP25119 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf1bP25119 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf1bP25119 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tnfrsf1bP25119 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf1bP25119 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf1bP25119 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf1bP25119 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Gm10418-201ENSMUST00000100943 576 ntBASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Gm12382-201ENSMUST00000122005 922 ntBASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Gm37292-201ENSMUST00000192062 758 ntBASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tnfrsf1bP25119 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tnfrsf1bP25119 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tnfrsf1bP25119 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Tnfrsf1bP25119 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Gm11643-201ENSMUST00000119578 864 ntBASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.32■□□□□ 0.2
Tnfrsf1bP25119 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Idnk-204ENSMUST00000226010 1898 ntBASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf1bP25119 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf1bP25119 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms