Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.89■□□□□ 0.29
BdnfP21237 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BdnfP21237 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BdnfP21237 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BdnfP21237 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.88■□□□□ 0.29
BdnfP21237 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BdnfP21237 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.88■□□□□ 0.29
BdnfP21237 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
BdnfP21237 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
BdnfP21237 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BdnfP21237 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BdnfP21237 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BdnfP21237 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BdnfP21237 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BdnfP21237 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.87■□□□□ 0.29
BdnfP21237 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BdnfP21237 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BdnfP21237 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.87■□□□□ 0.29
BdnfP21237 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BdnfP21237 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BdnfP21237 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
BdnfP21237 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BdnfP21237 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BdnfP21237 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BdnfP21237 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
BdnfP21237 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BdnfP21237 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BdnfP21237 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.85■□□□□ 0.29
BdnfP21237 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.85■□□□□ 0.29
BdnfP21237 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.85■□□□□ 0.29
BdnfP21237 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 Gm6365-201ENSMUST00000054711 744 ntBASIC16.85■□□□□ 0.29
BdnfP21237 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BdnfP21237 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
BdnfP21237 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
BdnfP21237 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.85■□□□□ 0.29
BdnfP21237 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BdnfP21237 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.84■□□□□ 0.29
BdnfP21237 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.84■□□□□ 0.29
BdnfP21237 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
BdnfP21237 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Gm42569-201ENSMUST00000200539 472 ntBASIC16.84■□□□□ 0.29
BdnfP21237 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.84■□□□□ 0.29
BdnfP21237 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
BdnfP21237 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
BdnfP21237 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BdnfP21237 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms