Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.19■□□□□ 0.18
Hmgn1P18608 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hmgn1P18608 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hmgn1P18608 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hmgn1P18608 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgn1P18608 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgn1P18608 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.17■□□□□ 0.18
Hmgn1P18608 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.17■□□□□ 0.18
Hmgn1P18608 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.17■□□□□ 0.18
Hmgn1P18608 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hmgn1P18608 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgn1P18608 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgn1P18608 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hmgn1P18608 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Hmgn1P18608 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgn1P18608 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgn1P18608 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgn1P18608 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgn1P18608 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Hmgn1P18608 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgn1P18608 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgn1P18608 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgn1P18608 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgn1P18608 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgn1P18608 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgn1P18608 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hmgn1P18608 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgn1P18608 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgn1P18608 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hmgn1P18608 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hmgn1P18608 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgn1P18608 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hmgn1P18608 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgn1P18608 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgn1P18608 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hmgn1P18608 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgn1P18608 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgn1P18608 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgn1P18608 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgn1P18608 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hmgn1P18608 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hmgn1P18608 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms