Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.91■□□□□ 0.3
Cntn1P12960 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cntn1P12960 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.9■□□□□ 0.3
Cntn1P12960 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cntn1P12960 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Gm11643-201ENSMUST00000119578 864 ntBASIC16.9■□□□□ 0.3
Cntn1P12960 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.9■□□□□ 0.3
Cntn1P12960 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.9■□□□□ 0.3
Cntn1P12960 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.9■□□□□ 0.3
Cntn1P12960 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cntn1P12960 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.9■□□□□ 0.3
Cntn1P12960 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cntn1P12960 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.9■□□□□ 0.3
Cntn1P12960 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.9■□□□□ 0.3
Cntn1P12960 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cntn1P12960 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Cntn1P12960 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cntn1P12960 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cntn1P12960 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cntn1P12960 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cntn1P12960 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cntn1P12960 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.88■□□□□ 0.29
Cntn1P12960 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cntn1P12960 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.88■□□□□ 0.29
Cntn1P12960 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.88■□□□□ 0.29
Cntn1P12960 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.88■□□□□ 0.29
Cntn1P12960 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.88■□□□□ 0.29
Cntn1P12960 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.88■□□□□ 0.29
Cntn1P12960 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.88■□□□□ 0.29
Cntn1P12960 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cntn1P12960 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cntn1P12960 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.87■□□□□ 0.29
Cntn1P12960 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Cntn1P12960 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Gm10517-202ENSMUST00000192970 758 ntBASIC16.87■□□□□ 0.29
Cntn1P12960 Gm21814-202ENSMUST00000203277 873 ntBASIC16.87■□□□□ 0.29
Cntn1P12960 Timm23-208ENSMUST00000226683 750 ntBASIC16.87■□□□□ 0.29
Cntn1P12960 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cntn1P12960 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cntn1P12960 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cntn1P12960 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.86■□□□□ 0.29
Cntn1P12960 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms