Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr2aP08775 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Polr2aP08775 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Polr2aP08775 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2aP08775 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2aP08775 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2aP08775 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.2■□□□□ 0.82
Polr2aP08775 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.2■□□□□ 0.82
Polr2aP08775 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.2■□□□□ 0.82
Polr2aP08775 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.2■□□□□ 0.82
Polr2aP08775 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2aP08775 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2aP08775 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2aP08775 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.2■□□□□ 0.82
Polr2aP08775 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2aP08775 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Polr2aP08775 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Polr2aP08775 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Polr2aP08775 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Polr2aP08775 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Polr2aP08775 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.19■□□□□ 0.82
Polr2aP08775 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.19■□□□□ 0.82
Polr2aP08775 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.19■□□□□ 0.82
Polr2aP08775 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Gm6623-201ENSMUST00000173570 544 ntBASIC20.19■□□□□ 0.82
Polr2aP08775 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.19■□□□□ 0.82
Polr2aP08775 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Polr2aP08775 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr2aP08775 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Polr2aP08775 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Polr2aP08775 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2aP08775 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Polr2aP08775 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.18■□□□□ 0.82
Polr2aP08775 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.18■□□□□ 0.82
Polr2aP08775 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Polr2aP08775 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2aP08775 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2aP08775 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2aP08775 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2aP08775 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.17■□□□□ 0.82
Polr2aP08775 Gm43347-201ENSMUST00000200226 580 ntBASIC20.17■□□□□ 0.82
Polr2aP08775 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Polr2aP08775 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2aP08775 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Polr2aP08775 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.17■□□□□ 0.82
Polr2aP08775 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.17■□□□□ 0.82
Polr2aP08775 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2aP08775 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2aP08775 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.17■□□□□ 0.82
Polr2aP08775 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2aP08775 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2aP08775 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2aP08775 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2aP08775 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.15■□□□□ 0.82
Polr2aP08775 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.15■□□□□ 0.82
Polr2aP08775 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Polr2aP08775 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2aP08775 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2aP08775 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Polr2aP08775 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Polr2aP08775 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Polr2aP08775 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Polr2aP08775 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2aP08775 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2aP08775 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2aP08775 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.15■□□□□ 0.82
Polr2aP08775 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Polr2aP08775 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Polr2aP08775 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.14■□□□□ 0.81
Polr2aP08775 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.14■□□□□ 0.81
Polr2aP08775 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.14■□□□□ 0.81
Polr2aP08775 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Polr2aP08775 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.14■□□□□ 0.81
Polr2aP08775 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Polr2aP08775 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Polr2aP08775 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.14■□□□□ 0.81
Polr2aP08775 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2aP08775 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Polr2aP08775 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Polr2aP08775 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Polr2aP08775 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms