Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a2P08122 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Col4a2P08122 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.48■□□□□ 0.23
Col4a2P08122 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Col4a2P08122 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.48■□□□□ 0.23
Col4a2P08122 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.48■□□□□ 0.23
Col4a2P08122 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.48■□□□□ 0.23
Col4a2P08122 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col4a2P08122 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 Gm37025-201ENSMUST00000195159 829 ntBASIC16.48■□□□□ 0.23
Col4a2P08122 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a2P08122 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.48■□□□□ 0.23
Col4a2P08122 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col4a2P08122 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Gm29518-201ENSMUST00000190858 372 ntBASIC16.47■□□□□ 0.23
Col4a2P08122 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a2P08122 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a2P08122 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col4a2P08122 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col4a2P08122 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.45■□□□□ 0.22
Col4a2P08122 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Gm27357-201ENSMUST00000183754 135 ntBASIC16.45■□□□□ 0.22
Col4a2P08122 Gm27704-201ENSMUST00000185094 107 ntBASIC16.45■□□□□ 0.22
Col4a2P08122 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.45■□□□□ 0.22
Col4a2P08122 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.45■□□□□ 0.22
Col4a2P08122 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Gm18669-201ENSMUST00000216049 778 ntBASIC16.45■□□□□ 0.22
Col4a2P08122 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Gm7461-201ENSMUST00000058918 827 ntBASIC16.45■□□□□ 0.22
Col4a2P08122 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col4a2P08122 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.45■□□□□ 0.22
Col4a2P08122 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Gm7153-201ENSMUST00000117092 455 ntBASIC16.45■□□□□ 0.22
Col4a2P08122 Il3ra-202ENSMUST00000223589 738 ntBASIC16.45■□□□□ 0.22
Col4a2P08122 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col4a2P08122 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col4a2P08122 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a2P08122 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a2P08122 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a2P08122 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Col4a2P08122 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col4a2P08122 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.44■□□□□ 0.22
Col4a2P08122 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.44■□□□□ 0.22
Col4a2P08122 Gm17808-201ENSMUST00000200859 894 ntBASIC16.44■□□□□ 0.22
Col4a2P08122 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a2P08122 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a2P08122 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.44■□□□□ 0.22
Col4a2P08122 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms