Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P06344 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.69■□□□□ 0.1
P06344 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
P06344 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
P06344 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.69■□□□□ 0.1
P06344 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
P06344 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.69■□□□□ 0.1
P06344 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
P06344 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P06344 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P06344 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.68■□□□□ 0.1
P06344 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Mir5122-201ENSMUST00000175004 89 ntBASIC15.68■□□□□ 0.1
P06344 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.68■□□□□ 0.1
P06344 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
P06344 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Fst-202ENSMUST00000223640 2612 ntBASIC15.68■□□□□ 0.1
P06344 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
P06344 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
P06344 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P06344 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
P06344 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
P06344 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
P06344 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
P06344 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.67■□□□□ 0.1
P06344 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.67■□□□□ 0.1
P06344 Gm37055-201ENSMUST00000191866 133 ntBASIC15.67■□□□□ 0.1
P06344 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
P06344 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.67■□□□□ 0.1
P06344 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P06344 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.66■□□□□ 0.1
P06344 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P06344 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P06344 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06344 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06344 Gm11643-201ENSMUST00000119578 864 ntBASIC15.66■□□□□ 0.1
P06344 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.66■□□□□ 0.1
P06344 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.66■□□□□ 0.1
P06344 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.66■□□□□ 0.1
P06344 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.66■□□□□ 0.1
P06344 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06344 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
P06344 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06344 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.66■□□□□ 0.1
P06344 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06344 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.66■□□□□ 0.1
P06344 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P06344 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms