Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P06336 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06336 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.29■□□□□ 0.2
P06336 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.29■□□□□ 0.2
P06336 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P06336 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06336 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
P06336 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.29■□□□□ 0.2
P06336 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06336 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06336 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06336 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P06336 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
P06336 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P06336 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.28■□□□□ 0.2
P06336 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06336 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06336 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06336 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06336 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06336 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
P06336 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06336 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.27■□□□□ 0.2
P06336 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.27■□□□□ 0.2
P06336 Gm11643-201ENSMUST00000119578 864 ntBASIC16.27■□□□□ 0.2
P06336 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.27■□□□□ 0.2
P06336 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06336 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06336 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
P06336 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P06336 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P06336 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
P06336 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
P06336 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
P06336 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P06336 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
P06336 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.26■□□□□ 0.19
P06336 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.26■□□□□ 0.19
P06336 Gm12382-201ENSMUST00000122005 922 ntBASIC16.26■□□□□ 0.19
P06336 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Gm37292-201ENSMUST00000192062 758 ntBASIC16.26■□□□□ 0.19
P06336 Gm43183-201ENSMUST00000200632 547 ntBASIC16.26■□□□□ 0.19
P06336 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.26■□□□□ 0.19
P06336 Gm10812-201ENSMUST00000099864 546 ntBASIC16.26■□□□□ 0.19
P06336 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
P06336 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
P06336 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
P06336 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.26■□□□□ 0.19
P06336 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P06336 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.25■□□□□ 0.19
P06336 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.25■□□□□ 0.19
P06336 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
P06336 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P06336 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
P06336 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.24■□□□□ 0.19
P06336 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.24■□□□□ 0.19
P06336 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
P06336 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
P06336 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms