Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ttc3O88196 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.54■□□□□ 0.56
Ttc3O88196 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.54■□□□□ 0.56
Ttc3O88196 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ttc3O88196 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ttc3O88196 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ttc3O88196 Gm16061-201ENSMUST00000122167 857 ntBASIC18.53■□□□□ 0.56
Ttc3O88196 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.53■□□□□ 0.56
Ttc3O88196 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ttc3O88196 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ttc3O88196 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ttc3O88196 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.53■□□□□ 0.56
Ttc3O88196 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Gm9731-201ENSMUST00000209480 747 ntBASIC18.53■□□□□ 0.56
Ttc3O88196 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ttc3O88196 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ttc3O88196 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc3O88196 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.52■□□□□ 0.56
Ttc3O88196 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc3O88196 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc3O88196 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc3O88196 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ttc3O88196 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.52■□□□□ 0.56
Ttc3O88196 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc3O88196 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc3O88196 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ttc3O88196 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ttc3O88196 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ttc3O88196 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ttc3O88196 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc3O88196 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc3O88196 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.51■□□□□ 0.55
Ttc3O88196 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc3O88196 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc3O88196 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc3O88196 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ttc3O88196 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc3O88196 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc3O88196 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc3O88196 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ttc3O88196 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.51■□□□□ 0.55
Ttc3O88196 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.51■□□□□ 0.55
Ttc3O88196 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Gm18101-201ENSMUST00000215769 548 ntBASIC18.5■□□□□ 0.55
Ttc3O88196 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.5■□□□□ 0.55
Ttc3O88196 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Ttc3O88196 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.5■□□□□ 0.55
Ttc3O88196 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.5■□□□□ 0.55
Ttc3O88196 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Gm18958-201ENSMUST00000174258 762 ntBASIC18.5■□□□□ 0.55
Ttc3O88196 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc3O88196 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ttc3O88196 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.49■□□□□ 0.55
Ttc3O88196 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ttc3O88196 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.49■□□□□ 0.55
Ttc3O88196 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.49■□□□□ 0.55
Ttc3O88196 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ttc3O88196 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc3O88196 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ttc3O88196 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ttc3O88196 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ttc3O88196 Mir8112-201ENSMUST00000184382 131 ntBASIC18.48■□□□□ 0.55
Ttc3O88196 Gm21362-201ENSMUST00000194272 928 ntBASIC18.48■□□□□ 0.55
Ttc3O88196 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ttc3O88196 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.48■□□□□ 0.55
Ttc3O88196 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms