Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm37856-201ENSMUST00000191634 999 ntBASIC16.72■□□□□ 0.27
Rdh5O55240 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rdh5O55240 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh5O55240 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.71■□□□□ 0.27
Rdh5O55240 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.71■□□□□ 0.27
Rdh5O55240 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh5O55240 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh5O55240 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh5O55240 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rdh5O55240 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh5O55240 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rdh5O55240 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.7■□□□□ 0.26
Rdh5O55240 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rdh5O55240 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.7■□□□□ 0.26
Rdh5O55240 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.7■□□□□ 0.26
Rdh5O55240 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Gm11249-201ENSMUST00000117071 859 ntBASIC16.7■□□□□ 0.26
Rdh5O55240 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rdh5O55240 Mir2861-201ENSMUST00000175539 82 ntBASIC16.7■□□□□ 0.26
Rdh5O55240 Gm27275-201ENSMUST00000184318 272 ntBASIC16.7■□□□□ 0.26
Rdh5O55240 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.7■□□□□ 0.26
Rdh5O55240 Trmt13-210ENSMUST00000198454 880 ntBASIC16.7■□□□□ 0.26
Rdh5O55240 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rdh5O55240 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.7■□□□□ 0.26
Rdh5O55240 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rdh5O55240 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rdh5O55240 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rdh5O55240 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rdh5O55240 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rdh5O55240 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.69■□□□□ 0.26
Rdh5O55240 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rdh5O55240 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Rdh5O55240 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.68■□□□□ 0.26
Rdh5O55240 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.68■□□□□ 0.26
Rdh5O55240 Gm29791-202ENSMUST00000207888 369 ntBASIC16.68■□□□□ 0.26
Rdh5O55240 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rdh5O55240 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rdh5O55240 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.68■□□□□ 0.26
Rdh5O55240 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.67■□□□□ 0.26
Rdh5O55240 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rdh5O55240 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.67■□□□□ 0.26
Rdh5O55240 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.67■□□□□ 0.26
Rdh5O55240 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rdh5O55240 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms