Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tnfrsf11aO35305 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.01■□□□□ 0.63
Tnfrsf11aO35305 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11aO35305 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11aO35305 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11aO35305 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11aO35305 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11aO35305 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11aO35305 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11aO35305 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11aO35305 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11aO35305 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19■□□□□ 0.63
Tnfrsf11aO35305 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11aO35305 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11aO35305 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11aO35305 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf11aO35305 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Gm10418-201ENSMUST00000100943 576 ntBASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf11aO35305 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tnfrsf11aO35305 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf11aO35305 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf11aO35305 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf11aO35305 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Gm12382-201ENSMUST00000122005 922 ntBASIC18.94■□□□□ 0.62
Tnfrsf11aO35305 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms