Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpsf2O35218 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cpsf2O35218 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cpsf2O35218 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cpsf2O35218 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Cpsf2O35218 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.86■□□□□ 0.61
Cpsf2O35218 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cpsf2O35218 Gm42569-201ENSMUST00000200539 472 ntBASIC18.86■□□□□ 0.61
Cpsf2O35218 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpsf2O35218 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.85■□□□□ 0.61
Cpsf2O35218 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cpsf2O35218 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cpsf2O35218 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.85■□□□□ 0.61
Cpsf2O35218 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cpsf2O35218 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.85■□□□□ 0.61
Cpsf2O35218 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf2O35218 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf2O35218 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.84■□□□□ 0.61
Cpsf2O35218 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf2O35218 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.84■□□□□ 0.61
Cpsf2O35218 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf2O35218 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.84■□□□□ 0.61
Cpsf2O35218 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.84■□□□□ 0.61
Cpsf2O35218 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf2O35218 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf2O35218 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpsf2O35218 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf2O35218 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf2O35218 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cpsf2O35218 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf2O35218 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.83■□□□□ 0.6
Cpsf2O35218 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.83■□□□□ 0.6
Cpsf2O35218 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf2O35218 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf2O35218 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf2O35218 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf2O35218 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf2O35218 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf2O35218 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf2O35218 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.82■□□□□ 0.6
Cpsf2O35218 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf2O35218 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf2O35218 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf2O35218 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf2O35218 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf2O35218 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cpsf2O35218 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf2O35218 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf2O35218 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.81■□□□□ 0.6
Cpsf2O35218 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.81■□□□□ 0.6
Cpsf2O35218 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.81■□□□□ 0.6
Cpsf2O35218 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.81■□□□□ 0.6
Cpsf2O35218 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cpsf2O35218 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf2O35218 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms