Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nfil3O08750 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Nfil3O08750 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nfil3O08750 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nfil3O08750 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nfil3O08750 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.27■□□□□ 0.83
Nfil3O08750 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nfil3O08750 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nfil3O08750 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nfil3O08750 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Nfil3O08750 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfil3O08750 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfil3O08750 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfil3O08750 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Nfil3O08750 Mir5122-201ENSMUST00000175004 89 ntBASIC20.26■□□□□ 0.83
Nfil3O08750 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfil3O08750 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.26■□□□□ 0.83
Nfil3O08750 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nfil3O08750 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfil3O08750 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nfil3O08750 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nfil3O08750 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nfil3O08750 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.25■□□□□ 0.83
Nfil3O08750 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.25■□□□□ 0.83
Nfil3O08750 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.25■□□□□ 0.83
Nfil3O08750 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nfil3O08750 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Nfil3O08750 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.24■□□□□ 0.83
Nfil3O08750 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.24■□□□□ 0.83
Nfil3O08750 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.24■□□□□ 0.83
Nfil3O08750 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nfil3O08750 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.24■□□□□ 0.83
Nfil3O08750 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nfil3O08750 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.24■□□□□ 0.83
Nfil3O08750 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nfil3O08750 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nfil3O08750 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Nfil3O08750 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.23■□□□□ 0.83
Nfil3O08750 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nfil3O08750 Gm37055-201ENSMUST00000191866 133 ntBASIC20.23■□□□□ 0.83
Nfil3O08750 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Nfil3O08750 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nfil3O08750 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.22■□□□□ 0.83
Nfil3O08750 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.22■□□□□ 0.83
Nfil3O08750 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nfil3O08750 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.22■□□□□ 0.83
Nfil3O08750 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nfil3O08750 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.21■□□□□ 0.83
Nfil3O08750 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.21■□□□□ 0.83
Nfil3O08750 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.21■□□□□ 0.83
Nfil3O08750 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nfil3O08750 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms