Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.78■□□□□ 0.76
B020004C17RikJ3QP07 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Gm10566-201ENSMUST00000086739 996 ntBASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.77■□□□□ 0.76
B020004C17RikJ3QP07 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.77■□□□□ 0.75
B020004C17RikJ3QP07 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Actl10-202ENSMUST00000226583 1501 ntBASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
B020004C17RikJ3QP07 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
B020004C17RikJ3QP07 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Mir3081-201ENSMUST00000175305 84 ntBASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Gm27742-201ENSMUST00000184667 60 ntBASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
B020004C17RikJ3QP07 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
B020004C17RikJ3QP07 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Gm6623-201ENSMUST00000173570 544 ntBASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Gm37722-201ENSMUST00000193757 208 ntBASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms