Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.62■□□□□ 0.41
Gm3139J3QK78 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.62■□□□□ 0.41
Gm3139J3QK78 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.62■□□□□ 0.41
Gm3139J3QK78 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.62■□□□□ 0.41
Gm3139J3QK78 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3139J3QK78 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3139J3QK78 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm3139J3QK78 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3139J3QK78 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3139J3QK78 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Gm5417-201ENSMUST00000079706 384 ntBASIC17.61■□□□□ 0.41
Gm3139J3QK78 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm3139J3QK78 Idnk-204ENSMUST00000226010 1898 ntBASIC17.61■□□□□ 0.41
Gm3139J3QK78 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm3139J3QK78 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3139J3QK78 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Gm3139J3QK78 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.58■□□□□ 0.41
Gm3139J3QK78 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3139J3QK78 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3139J3QK78 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3139J3QK78 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.58■□□□□ 0.4
Gm3139J3QK78 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3139J3QK78 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm3139J3QK78 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Gm12085-201ENSMUST00000119263 940 ntBASIC17.57■□□□□ 0.4
Gm3139J3QK78 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.57■□□□□ 0.4
Gm3139J3QK78 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gm3139J3QK78 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms