Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh9F8VPK8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Gm44549-201ENSMUST00000208351 577 ntBASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh9F8VPK8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Gm12933-201ENSMUST00000120203 872 ntBASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Mir8112-201ENSMUST00000184382 131 ntBASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh9F8VPK8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Pcdh9F8VPK8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh9F8VPK8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh9F8VPK8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh9F8VPK8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Gm10418-201ENSMUST00000100943 576 ntBASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Gm26524-201ENSMUST00000192339 390 ntBASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh9F8VPK8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdh9F8VPK8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh9F8VPK8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Gm13148-201ENSMUST00000118892 745 ntBASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh9F8VPK8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms