Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ube4aE9Q735 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ube4aE9Q735 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ube4aE9Q735 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ube4aE9Q735 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ube4aE9Q735 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Ube4aE9Q735 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ube4aE9Q735 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ube4aE9Q735 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.26■□□□□ 0.99
Ube4aE9Q735 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Gm7367-201ENSMUST00000057611 492 ntBASIC21.26■□□□□ 0.99
Ube4aE9Q735 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ube4aE9Q735 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.25■□□□□ 0.99
Ube4aE9Q735 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.25■□□□□ 0.99
Ube4aE9Q735 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ube4aE9Q735 Idnk-204ENSMUST00000226010 1898 ntBASIC21.24■□□□□ 0.99
Ube4aE9Q735 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ube4aE9Q735 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ube4aE9Q735 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ube4aE9Q735 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ube4aE9Q735 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ube4aE9Q735 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ube4aE9Q735 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube4aE9Q735 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Gm10819-201ENSMUST00000099988 561 ntBASIC21.23■□□□□ 0.99
Ube4aE9Q735 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.23■□□□□ 0.99
Ube4aE9Q735 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ube4aE9Q735 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4aE9Q735 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4aE9Q735 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4aE9Q735 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ube4aE9Q735 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4aE9Q735 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4aE9Q735 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.22■□□□□ 0.99
Ube4aE9Q735 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4aE9Q735 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4aE9Q735 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube4aE9Q735 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Gm17661-201ENSMUST00000170317 270 ntBASIC21.21■□□□□ 0.99
Ube4aE9Q735 Mir1668-201ENSMUST00000184114 107 ntBASIC21.21■□□□□ 0.99
Ube4aE9Q735 Gm33142-201ENSMUST00000193913 867 ntBASIC21.21■□□□□ 0.99
Ube4aE9Q735 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ube4aE9Q735 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube4aE9Q735 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms